Strain Functional Diagnosis
Know whether your strain works, for which crops and what to combine it with.
- Genome, taxonomy and plant-growth traits
- Biosynthetic clusters and safety screen
- Clear go / no-go / validate recommendation
Bioinformatics consultancy · Remote · English & Spanish
Genomic data, integrated into decisions for agro-biogenomics
We turn genomes, metagenomes and transcriptomes into clear answers: which strain to scale, what changed in your soil, how to treat an effluent, which biomarkers matter. Every project ends with a recommendation, not just files.
4business lines
17service areas
2–4weeks typical turnaround
EN · ESreports in both languages
The bottleneck
Sequencing is cheap. Interpretation is not.
I have the genome, but I don't know what it tells me.
Raw reads and automatic annotations with no biological reading.
Is my strain safe, and what can it produce?
Resistance, virulence and biosynthetic potential left unchecked.
Our analyses can't be reproduced.
Loose scripts, manual steps and results nobody can repeat.
Services
Four business lines, one integrated method
Pick a line to see each service, what you receive and a starting price. Final quotes follow a free scoping call.
Where most clients start
Three flagship analyses
Microbiome Insight
Soil, rhizosphere or vineyard: what changed with your treatment and why.
- 16S/ITS or shotgun profiling
- Differential taxa and functions
- Field-trial interpretation
Bio-input Genomic Audit
Does the product contain what it claims? Identity, purity and risks.
- Identity confirmed by whole-genome ANI
- Contaminants and resistance genes
- Claimed functions checked against the genome
Packages
Turnkey packages and monthly retainers
Prices in USD, before taxes. Lower end of each range for local SMEs and academic groups; upper end for international companies. Cloud computing and sequencing are passed through at cost.
Your starting point
Bring data, use public data, or let us sequence
Your own data
Send FASTQ files, assemblies or count tables with your metadata through a secure shared folder.
Public data
We mine NCBI, ENA, GEO and MG-RAST to answer your question before you spend on sequencing.
Managed sequencing
We coordinate Illumina or Nanopore sequencing with a provider, check data quality and deliver the full analysis.
How we work
From data to decision in six steps
Free call
30 minutes on your goal, data and constraints.
Proposal
Scope, deliverables, timeline and a fixed price.
Data and QC
Secure transfer, checksums and quality control.
Analysis
Validated, versioned pipelines (nf-core, Nextflow).
Interpretation
Biological meaning and a clear recommendation.
Delivery and support
Walkthrough meeting and 30 days of questions.
Deliverables
What every client receives
Executive summary
1–2 pages in plain language: findings and recommendation.
Technical report
Methods, results, figures, limitations and QC.
Result files
FASTA, GFF, VCF, tables and high-resolution figures.
Code and environment
Versioned repository and containers for full reproducibility.
Bilingual option
Full report in English and Spanish on request.
Meeting and support
Results walkthrough and 30 days of follow-up.
- Executive summary · 1 p
- Assembly and quality · N50, completeness, contamination
- Genomic taxonomy · ANI, dDDH, tree
- Plant-growth and biocontrol traits · evidence matrix
- Biosynthetic gene clusters · similarity to known compounds
- Safety screen · resistance, virulence, plasmids
- Benchmark vs. reference strains
- Recommendation and next lab steps
- Methods, versions and citations
About
Founded by a scientist who has done the bench work
GENEcision is led by David, PhD in Biological Sciences, who combines microbiology, bioinformatics and data science. The same person who designs your analysis interprets it and explains it to you.
- PhD in Biological Sciences · IBR-CONICET / National University of Rosario
- MSc in Biotechnology
- First-author publications on endophytic Streptomyces as agricultural bio-inputs
- High-GC bacterial genomes and biosynthetic clusters (PKS, NRPS, RiPPs)
- Data science: multivariate statistics, machine learning, R and Python
FAQ
Common questions
How do you keep my data confidential?
We sign an NDA before receiving data, work only on encrypted storage and delete raw data 90 days after delivery unless you ask us to keep it.
Which file formats do you accept?
FASTQ, BAM/CRAM, FASTA assemblies, VCF and count tables, plus your sample metadata in a spreadsheet.
How long does a project take?
Most projects take 2–4 weeks after data and payment are received. The proposal states the exact timeline.
Do you issue clinical diagnostic reports?
No. Human genomics services are for research use. Clinical reporting is done through accredited partner laboratories.
How do payments work?
50% upfront and 50% on delivery, in USD by international transfer. Retainers are billed monthly.
Can you work with data I don't have yet?
Yes. We can design the experiment, recommend a sequencing strategy and coordinate sequencing with a provider.
Contact
Tell us about your data
Book a free 30-minute call or send a short description. We reply within two business days.
Free scoping call
Pick a time that suits you. You leave with a recommended approach and a time and cost estimate.
hello@genecision.com